Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.35□□□□□ -0.27
CCRL2O00421 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CCRL2O00421 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.35□□□□□ -0.27
CCRL2O00421 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.35□□□□□ -0.27
CCRL2O00421 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCRL2O00421 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.35□□□□□ -0.27
CCRL2O00421 Z97205.2-201ENST00000564697 1639 ntBASIC13.35□□□□□ -0.27
CCRL2O00421 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
CCRL2O00421 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCRL2O00421 MIR193BHG-211ENST00000641433 5365 ntBASIC13.35□□□□□ -0.27
CCRL2O00421 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 MYADML-201ENST00000474610 2147 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 AC215219.1-201ENST00000400706 1817 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 KRT8P12-202ENST00000472924 1397 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.34□□□□□ -0.27
CCRL2O00421 AL137783.1-201ENST00000623494 1896 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.34□□□□□ -0.27
CCRL2O00421 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 ACTG1P14-201ENST00000446382 1122 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 SPDYE11-202ENST00000450699 704 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 SPDYE9P-201ENST00000570642 692 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 SPDYE10P-202ENST00000612005 668 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 SPDYE8P-202ENST00000612377 668 ntBASIC13.34□□□□□ -0.27
CCRL2O00421 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCRL2O00421 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCRL2O00421 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCRL2O00421 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCRL2O00421 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.33□□□□□ -0.27
CCRL2O00421 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.33□□□□□ -0.27
CCRL2O00421 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCRL2O00421 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCRL2O00421 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCRL2O00421 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCRL2O00421 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.33□□□□□ -0.27
CCRL2O00421 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.33□□□□□ -0.28
CCRL2O00421 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.33□□□□□ -0.28
CCRL2O00421 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 YBX2P1-201ENST00000394192 760 ntBASIC13.33□□□□□ -0.28
CCRL2O00421 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.33□□□□□ -0.28
CCRL2O00421 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.33□□□□□ -0.28
CCRL2O00421 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCRL2O00421 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms