Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 ZNF767P-206ENST00000513792 565 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 AC104982.3-201ENST00000581995 514 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 PPY2P-201ENST00000582808 702 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 AC103810.3-201ENST00000583567 96 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 AL096828.3-201ENST00000615354 462 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 KRT8P4-201ENST00000509735 1454 ntBASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 AC136759.1-202ENST00000530858 2194 ntBASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 RN7SL713P-201ENST00000582127 302 ntBASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 AC073413.1-201ENST00000603927 732 ntBASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPDC1A2A3K4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AL928921.2-201ENST00000641325 2442 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AC012617.1-204ENST00000586340 2305 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 MYADML-201ENST00000474610 2147 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AP003171.2-201ENST00000528208 925 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AP001258.2-201ENST00000529891 490 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AL008638.5-201ENST00000623814 1298 ntBASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPDC1A2A3K4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms