Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 KLF2P2-201ENST00000416807 1039 ntBASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RN7SL560P-201ENST00000577943 264 ntBASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC006453.4-201ENST00000636949 1252 ntBASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AHCYP2-201ENST00000430630 1300 ntBASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 DGCR9-201ENST00000609630 2415 ntBASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGB6Q9Y5F9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 INTS4P1-203ENST00000641008 3683 ntBASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 COL6A4P2-202ENST00000504443 2753 ntBASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 AC020907.1-201ENST00000616460 1350 ntBASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGB6Q9Y5F9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms