Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.02■□□□□ 0.31
CTDP1Q9Y5B0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 KRT8P19-201ENST00000551916 1455 ntBASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 MAGEA5-201ENST00000446757 942 ntBASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTDP1Q9Y5B0 AC092135.3-201ENST00000624151 1846 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PPT1-215ENST00000641471 2368 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ELK2AP-201ENST00000392510 1007 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ISCA2P1-201ENST00000425548 448 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 AL157407.1-201ENST00000435784 904 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 POU5F1P2-201ENST00000521750 823 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 RN7SL574P-201ENST00000581512 297 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 LINC01101-201ENST00000622953 1884 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 PEG13-201ENST00000631594 5667 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FAM90A7P-201ENST00000382628 1395 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 FAM90A23P-201ENST00000400136 1395 ntBASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CTDP1Q9Y5B0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms