Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 FAM86LP-201ENST00000478302 853 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC211476.1-201ENST00000503899 468 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC022616.1-201ENST00000518688 554 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC093813.1-201ENST00000605066 256 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AL603764.1-201ENST00000636452 321 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AC015688.4-201ENST00000580780 1647 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 MRPL37P1-201ENST00000592451 1337 ntBASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
UBE2D4Q9Y2X8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC003102.2-201ENST00000589195 1469 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC027612.1-201ENST00000445234 2395 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC015909.5-201ENST00000624336 2266 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 KRT18P13-201ENST00000400056 1290 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC112482.1-201ENST00000492080 688 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 HLA-J-203ENST00000494367 1087 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 AC026434.2-201ENST00000506094 1078 ntBASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
UBE2D4Q9Y2X8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms