Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AL662890.1-201ENST00000396818 632 ntBASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AC078875.1-201ENST00000431907 724 ntBASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 RCC2P8-201ENST00000502779 1035 ntBASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AC103988.2-201ENST00000561804 725 ntBASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AP001505.2-201ENST00000616815 443 ntBASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCF1Q9UBD9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.08□□□□□ -0.31
CLCF1Q9UBD9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLCF1Q9UBD9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLCF1Q9UBD9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLCF1Q9UBD9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLCF1Q9UBD9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC139712.1-201ENST00000378256 1875 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC009093.10-201ENST00000641956 1442 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 ACTG1P2-201ENST00000415776 1125 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 ACTG1P11-201ENST00000425411 1125 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 RN7SL11P-201ENST00000471305 293 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 RBM8B-201ENST00000555532 525 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC133540.1-201ENST00000620845 1019 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC068587.10-201ENST00000641210 219 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC136759.1-202ENST00000530858 2194 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC144522.1-201ENST00000625111 1658 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 TMBIM7P-202ENST00000641474 1516 ntBASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCF1Q9UBD9 AC008132.1-202ENST00000342005 1389 ntBASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms