Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AJ011931.1-201ENST00000618749 2492 ntBASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AL590640.2-201ENST00000457038 527 ntBASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 COX5BP1-201ENST00000507622 393 ntBASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AC004466.1-201ENST00000599515 1080 ntBASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AL138725.1-201ENST00000407347 1314 ntBASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PARPBPQ9NWS1 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 LINC00528-201ENST00000600723 2160 ntBASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 AC013726.1-201ENST00000563747 2285 ntBASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.27□□□□□ -0.28
PARPBPQ9NWS1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 FAM21FP-201ENST00000426241 1131 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 CSF2RBP1-201ENST00000447905 391 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 HOMER2P2-201ENST00000451621 847 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 RN7SL713P-201ENST00000582127 302 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 OR10B1P-201ENST00000601666 907 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 AC138696.2-201ENST00000607376 223 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ZACNP1-201ENST00000612259 710 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 AC003102.2-201ENST00000589195 1469 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms