Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX8Q9HC52 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NCLP1-201ENST00000445357 1963 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC126335.2-201ENST00000623362 4637 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 KRT18P13-201ENST00000400056 1290 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CNN2P11-201ENST00000429351 262 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC103988.2-201ENST00000561804 725 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC036164.1-201ENST00000570544 333 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 AC004466.1-201ENST00000599515 1080 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 SRD5A3P1-201ENST00000603021 949 ntBASIC16.49■□□□□ 0.23
CBX8Q9HC52 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX8Q9HC52 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 AC100757.3-201ENST00000622361 1406 ntBASIC16.48■□□□□ 0.23
CBX8Q9HC52 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 AC211486.1-202ENST00000416371 468 ntBASIC16.48■□□□□ 0.23
CBX8Q9HC52 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 AC211476.1-201ENST00000503899 468 ntBASIC16.48■□□□□ 0.23
CBX8Q9HC52 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 AC009407.1-201ENST00000568958 598 ntBASIC16.48■□□□□ 0.23
CBX8Q9HC52 AL590560.3-201ENST00000623350 461 ntBASIC16.48■□□□□ 0.23
CBX8Q9HC52 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX8Q9HC52 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBX8Q9HC52 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 AL138725.1-201ENST00000407347 1314 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 TUBB8P4-201ENST00000511806 1324 ntBASIC16.47■□□□□ 0.23
CBX8Q9HC52 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CBX8Q9HC52 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX8Q9HC52 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms