Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC073548.1-201ENST00000624088 1882 ntBASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 AC083964.2-201ENST00000623988 2396 ntBASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AMBRA1Q9C0C7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SPDYE19P-201ENST00000338590 713 ntBASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 NUS1P3-201ENST00000423502 862 ntBASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 AC055876.2-201ENST00000531834 546 ntBASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RRP7BP-205ENST00000566851 833 ntBASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 AL132655.2-201ENST00000596276 594 ntBASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AMBRA1Q9C0C7 SLC7A15P-201ENST00000424028 1363 ntBASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC111170.3-201ENST00000624282 2464 ntBASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RN7SL399P-201ENST00000471648 279 ntBASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 API5-211ENST00000534695 560 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms