Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 AC003102.2-201ENST00000589195 1469 ntBASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM54Q9BYV2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AL359881.3-201ENST00000602640 1721 ntBASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 RN7SL837P-201ENST00000463010 287 ntBASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 MIR3197-201ENST00000582241 73 ntBASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 MSTO2P-201ENST00000314835 1709 ntBASIC14.61□□□□□ -0.07
TRIM54Q9BYV2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 AL136172.1-201ENST00000598590 1394 ntBASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 AL354702.1-201ENST00000442006 1960 ntBASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 AC005229.1-201ENST00000392885 409 ntBASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRIM54Q9BYV2 MESTP3-201ENST00000503460 968 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms