Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-33P-201ENST00000384793 107 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 OR9R1P-201ENST00000412200 877 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RPS15AP38-201ENST00000413110 372 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC16A6P1-201ENST00000413214 1059 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 JKAMPP1-201ENST00000413804 919 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AL450311.2-201ENST00000428753 503 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FABP5P11-201ENST00000430910 397 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AF241728.1-201ENST00000432359 1180 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 HSPA8P20-201ENST00000448737 1007 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 Y_RNA.639-201ENST00000458981 102 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RPL12P42-201ENST00000481802 499 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-388P-201ENST00000517012 105 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-389P-201ENST00000517048 105 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC109635.4-202ENST00000531666 412 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC087878.1-201ENST00000560709 574 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 NTF6G-201ENST00000591094 616 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 OR7E94P-202ENST00000601375 790 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 CYP2T3P-201ENST00000601990 817 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AL133247.2-201ENST00000603236 482 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 IGKV3OR2-5-201ENST00000605851 281 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC009113.1-201ENST00000570267 2443 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC117529.2-201ENST00000512159 2068 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AC141586.3-201ENST00000562166 1838 ntBASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-3Q9BYR6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC005082.1-201ENST00000413042 2259 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms