Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 AC093512.1-201ENST00000617969 520 ntBASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 KRT18P28-201ENST00000453838 1332 ntBASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 AC131212.3-201ENST00000624087 4219 ntBASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 CICP8-201ENST00000455800 2813 ntBASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC111170.3-201ENST00000624282 2464 ntBASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AL512638.1-201ENST00000457493 794 ntBASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AL359711.2-201ENST00000563105 872 ntBASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC124283.3-201ENST00000570869 594 ntBASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms