Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 PPP1R2P4-201ENST00000424051 595 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AL929302.1-201ENST00000426556 871 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SERBP1P2-201ENST00000436888 1164 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 GRPEL2P1-201ENST00000453145 339 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AL160191.2-201ENST00000603975 601 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 LAP3P2-201ENST00000454686 1454 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 HYMAI-201ENST00000635591 3347 ntBASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA5Q96FF9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA5Q96FF9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA5Q96FF9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA5Q96FF9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA5Q96FF9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 AC006529.1-201ENST00000459978 637 ntBASIC16.89■□□□□ 0.29
CDCA5Q96FF9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 AC092862.1-201ENST00000541534 533 ntBASIC16.89■□□□□ 0.29
CDCA5Q96FF9 KLF17P1-201ENST00000547105 1126 ntBASIC16.89■□□□□ 0.29
CDCA5Q96FF9 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 AP005264.5-201ENST00000590066 467 ntBASIC16.89■□□□□ 0.29
CDCA5Q96FF9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA5Q96FF9 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA5Q96FF9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA5Q96FF9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA5Q96FF9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms