Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 C1QBPP1-201ENST00000400117 770 ntBASIC15.22■□□□□ 0.03
CCDC97Q96F63 AC134915.1-201ENST00000426461 574 ntBASIC15.22■□□□□ 0.03
CCDC97Q96F63 AL442647.2-201ENST00000429864 857 ntBASIC15.22■□□□□ 0.03
CCDC97Q96F63 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 KLF2P4-201ENST00000451959 1225 ntBASIC15.22■□□□□ 0.03
CCDC97Q96F63 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC97Q96F63 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC97Q96F63 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AC007787.1-201ENST00000588095 1583 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 KRT8P22-201ENST00000562317 1415 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 BRWD1P1-201ENST00000401091 371 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 SAMD11P1-201ENST00000571429 661 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 AL022328.1-201ENST00000610050 478 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC97Q96F63 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC97Q96F63 REXO1L5P-201ENST00000622260 2098 ntBASIC15.21■□□□□ 0.03
CCDC97Q96F63 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.21■□□□□ 0.02
CCDC97Q96F63 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CCDC97Q96F63 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.21■□□□□ 0.02
CCDC97Q96F63 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CCDC97Q96F63 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC97Q96F63 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC97Q96F63 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC97Q96F63 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC97Q96F63 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC97Q96F63 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC97Q96F63 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC97Q96F63 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC97Q96F63 AC093525.8-201ENST00000624099 1342 ntBASIC15.2■□□□□ 0.02
CCDC97Q96F63 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms