Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC013553.1-201ENST00000560906 267 ntBASIC14.45□□□□□ -0.1
CLDN23Q96B33 TRMT112P3-201ENST00000580149 358 ntBASIC14.45□□□□□ -0.1
CLDN23Q96B33 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 AC008972.2-201ENST00000606587 494 ntBASIC14.45□□□□□ -0.1
CLDN23Q96B33 MME-218ENST00000625667 363 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN23Q96B33 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN23Q96B33 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC006987.1-201ENST00000413610 527 ntBASIC14.44□□□□□ -0.1
CLDN23Q96B33 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AL451000.1-201ENST00000451300 1186 ntBASIC14.44□□□□□ -0.1
CLDN23Q96B33 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ALG1L3P-201ENST00000503331 765 ntBASIC14.44□□□□□ -0.1
CLDN23Q96B33 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC145285.5-201ENST00000562217 361 ntBASIC14.44□□□□□ -0.1
CLDN23Q96B33 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AL021707.6-201ENST00000609212 491 ntBASIC14.44□□□□□ -0.1
CLDN23Q96B33 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN23Q96B33 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN23Q96B33 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CLDN23Q96B33 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CLDN23Q96B33 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN23Q96B33 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CLDN23Q96B33 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN23Q96B33 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms