Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS33AQ96AX1 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AL139094.1-201ENST00000405549 1188 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 NUS1P3-201ENST00000423502 862 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 RN7SL399P-201ENST00000471648 279 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AC067863.1-201ENST00000494933 530 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 BX539320.1-201ENST00000623759 877 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 SALL4P5-201ENST00000419001 1760 ntBASIC14.24□□□□□ -0.13
VPS33AQ96AX1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS33AQ96AX1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 DGCR9-201ENST00000609630 2415 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 DUX4L27-201ENST00000554796 1261 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC023310.3-201ENST00000557027 670 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC100756.1-201ENST00000562736 682 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC104794.3-201ENST00000566840 1248 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC138749.3-201ENST00000567691 622 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms