Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 COG4-212ENST00000564653 590 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 SAMD11P1-201ENST00000571429 661 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 BX640514.1-201ENST00000583223 1918 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AL023775.1-201ENST00000454907 1746 ntBASIC13.99□□□□□ -0.17
TM9SF4Q92544 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 FNTAP2-201ENST00000430308 634 ntBASIC13.99□□□□□ -0.17
TM9SF4Q92544 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 BX284668.4-201ENST00000453917 508 ntBASIC13.99□□□□□ -0.17
TM9SF4Q92544 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AC007663.3-201ENST00000609632 465 ntBASIC13.99□□□□□ -0.17
TM9SF4Q92544 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 AC084364.1-201ENST00000551967 1556 ntBASIC13.99□□□□□ -0.17
TM9SF4Q92544 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF4Q92544 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF4Q92544 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms