Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 HSPA7-201ENST00000445535 1927 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AC027601.5-201ENST00000624065 2482 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 CICP11-201ENST00000434745 2827 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AC079178.1-201ENST00000420915 656 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 RN7SL713P-201ENST00000582127 302 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 REXO1L2P-201ENST00000425429 2069 ntBASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDND2Q8NHS1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 AL928921.2-201ENST00000641325 2442 ntBASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 AL606495.2-201ENST00000605867 535 ntBASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDND2Q8NHS1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms