Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC063926.3-201ENST00000624734 5658 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC018735.1-201ENST00000437208 1502 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC012617.1-204ENST00000586340 2305 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC005089.1-201ENST00000619486 2241 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 FAM58BP-201ENST00000439056 645 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 FAM8A2P-201ENST00000528813 1142 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC005324.6-201ENST00000587972 613 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC091271.1-201ENST00000611877 1162 ntBASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZIC4Q8N9L1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 KRT8P29-201ENST00000420409 1371 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AL008718.2-201ENST00000609206 1313 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 ACTBP11-201ENST00000436287 1126 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 POM121L10P-201ENST00000436994 1285 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AC012441.2-201ENST00000444843 739 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AL160314.3-201ENST00000556041 767 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AC022748.3-201ENST00000621828 275 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms