Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 INE2-201ENST00000630399 1874 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 RN7SKP230-201ENST00000365642 335 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 BAATP1-201ENST00000412284 1225 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC012441.1-201ENST00000446669 685 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC092364.2-202ENST00000597012 1073 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 CLUHP2-201ENST00000426660 1303 ntBASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00346Q8IVM7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC245100.3-201ENST00000441281 285 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CRB3P1-201ENST00000449338 276 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC068587.3-201ENST00000526613 355 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC131206.1-201ENST00000538078 1211 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 PTP4A1P2-201ENST00000546033 454 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 MIR5189-201ENST00000577370 114 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 RPSAP52-203ENST00000622976 1023 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 MYADML-201ENST00000474610 2147 ntBASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00346Q8IVM7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00346Q8IVM7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms