Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 RN7SL396P-201ENST00000471086 295 ntBASIC19.26■□□□□ 0.67
USP31Q70CQ4 RN7SL23P-201ENST00000484055 275 ntBASIC19.26■□□□□ 0.67
USP31Q70CQ4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.26■□□□□ 0.67
USP31Q70CQ4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP31Q70CQ4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 HYMAI-201ENST00000635591 3347 ntBASIC19.25■□□□□ 0.67
USP31Q70CQ4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 GCSHP3-201ENST00000431120 391 ntBASIC19.25■□□□□ 0.67
USP31Q70CQ4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.25■□□□□ 0.67
USP31Q70CQ4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 SNORD3B-1-201ENST00000577988 758 ntBASIC19.25■□□□□ 0.67
USP31Q70CQ4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP31Q70CQ4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP31Q70CQ4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 PSMD4P1-201ENST00000433951 1109 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC226150.1-201ENST00000544259 466 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 C2orf69P1-201ENST00000563532 1093 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC005357.2-202ENST00000590507 1060 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC091769.1-201ENST00000619576 568 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 AC011498.7-201ENST00000624986 2027 ntBASIC19.24■□□□□ 0.67
USP31Q70CQ4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.24■□□□□ 0.67
USP31Q70CQ4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP31Q70CQ4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 AC103592.1-201ENST00000394513 664 ntBASIC19.23■□□□□ 0.67
USP31Q70CQ4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP31Q70CQ4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.23■□□□□ 0.67
USP31Q70CQ4 CHCHD2P2-201ENST00000503744 321 ntBASIC19.23■□□□□ 0.67
USP31Q70CQ4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 AC093909.3-201ENST00000504783 336 ntBASIC19.23■□□□□ 0.67
USP31Q70CQ4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.23■□□□□ 0.67
USP31Q70CQ4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms