Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHROOM1Q2M3G4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 AHCYP4-201ENST00000419201 1315 ntBASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 DUX4L50-201ENST00000455245 715 ntBASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHROOM1Q2M3G4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHROOM1Q2M3G4 AL513477.1-201ENST00000602865 2407 ntBASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 AC007326.1-201ENST00000604539 458 ntBASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 AC005632.3-201ENST00000605544 308 ntBASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 COX6A1P2-201ENST00000620597 330 ntBASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 KRT8P31-201ENST00000504812 1408 ntBASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SHROOM1Q2M3G4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms