Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 MIR3907-201ENST00000579424 151 ntBASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AL157813.1-201ENST00000612996 587 ntBASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AL353770.1-201ENST00000614915 403 ntBASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 AL136295.7-201ENST00000619226 1200 ntBASIC17.65■□□□□ 0.42
RFX7Q2KHR2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX7Q2KHR2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX7Q2KHR2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.64■□□□□ 0.42
RFX7Q2KHR2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.64■□□□□ 0.42
RFX7Q2KHR2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX7Q2KHR2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 RN7SKP214-201ENST00000364208 315 ntBASIC17.64■□□□□ 0.41
RFX7Q2KHR2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 FXNP2-201ENST00000411625 547 ntBASIC17.64■□□□□ 0.41
RFX7Q2KHR2 AL133466.1-201ENST00000447582 150 ntBASIC17.64■□□□□ 0.41
RFX7Q2KHR2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.64■□□□□ 0.41
RFX7Q2KHR2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 CYP4F23P-201ENST00000593402 1579 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 AL157791.1-201ENST00000553667 1699 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 MIR33B-201ENST00000385104 96 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 HINT2P1-201ENST00000419438 481 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX7Q2KHR2 CEP164P1-201ENST00000455142 418 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 AC012618.1-201ENST00000461223 412 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 TMEM198B-204ENST00000484016 896 ntBASIC17.63■□□□□ 0.41
RFX7Q2KHR2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms