Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLTCQ00610 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTCQ00610 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTCQ00610 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLTCQ00610 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTCQ00610 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLTCQ00610 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.64■□□□□ 0.9
CLTCQ00610 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLTCQ00610 AC103563.1-201ENST00000429316 123 ntBASIC20.64■□□□□ 0.9
CLTCQ00610 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC20.64■□□□□ 0.9
CLTCQ00610 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.64■□□□□ 0.9
CLTCQ00610 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.64■□□□□ 0.9
CLTCQ00610 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLTCQ00610 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTCQ00610 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLTCQ00610 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTCQ00610 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.64■□□□□ 0.89
CLTCQ00610 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CLTCQ00610 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTCQ00610 U3.5-201ENST00000363448 216 ntBASIC20.64■□□□□ 0.89
CLTCQ00610 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTCQ00610 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC20.64■□□□□ 0.89
CLTCQ00610 AC005746.3-201ENST00000614751 393 ntBASIC20.64■□□□□ 0.89
CLTCQ00610 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC20.64■□□□□ 0.89
CLTCQ00610 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC20.64■□□□□ 0.89
CLTCQ00610 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLTCQ00610 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLTCQ00610 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLTCQ00610 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 RNA5SP491-201ENST00000362936 118 ntBASIC20.63■□□□□ 0.89
CLTCQ00610 ACTBP14-201ENST00000411655 1089 ntBASIC20.63■□□□□ 0.89
CLTCQ00610 ACY3-202ENST00000529256 933 ntTSL 3 BASIC20.63■□□□□ 0.89
CLTCQ00610 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC20.63■□□□□ 0.89
CLTCQ00610 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CLTCQ00610 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLTCQ00610 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC20.63■□□□□ 0.89
CLTCQ00610 AL050341.2-201ENST00000567508 1541 ntBASIC20.63■□□□□ 0.89
CLTCQ00610 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLTCQ00610 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLTCQ00610 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTCQ00610 AL049840.2-201ENST00000602722 535 ntBASIC20.62■□□□□ 0.89
CLTCQ00610 KF455155.1-201ENST00000604493 303 ntBASIC20.62■□□□□ 0.89
CLTCQ00610 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC20.62■□□□□ 0.89
CLTCQ00610 PPT1-215ENST00000641471 2368 ntBASIC20.62■□□□□ 0.89
CLTCQ00610 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLTCQ00610 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CLTCQ00610 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLTCQ00610 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLTCQ00610 AC015909.5-201ENST00000624336 2266 ntBASIC20.61■□□□□ 0.89
CLTCQ00610 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC20.61■□□□□ 0.89
CLTCQ00610 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLTCQ00610 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC20.61■□□□□ 0.89
CLTCQ00610 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC20.61■□□□□ 0.89
CLTCQ00610 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CLTCQ00610 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.61■□□□□ 0.89
CLTCQ00610 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CLTCQ00610 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLTCQ00610 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.61■□□□□ 0.89
CLTCQ00610 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.61■□□□□ 0.89
CLTCQ00610 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLTCQ00610 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms