Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AGAP10P-201ENST00000454844 2418 ntBASIC10.48□□□□□ -0.73
RPL39P62891 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 AC011498.7-201ENST00000624986 2027 ntBASIC10.48□□□□□ -0.73
RPL39P62891 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
RPL39P62891 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 AL158070.2-201ENST00000623713 1621 ntBASIC10.48□□□□□ -0.73
RPL39P62891 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 MYADML-201ENST00000474610 2147 ntBASIC10.48□□□□□ -0.73
RPL39P62891 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 GPS2P2-201ENST00000430745 888 ntBASIC10.48□□□□□ -0.73
RPL39P62891 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 ALG1L5P-201ENST00000482043 771 ntBASIC10.48□□□□□ -0.73
RPL39P62891 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.48□□□□□ -0.73
RPL39P62891 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.48□□□□□ -0.73
RPL39P62891 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 AC000095.1-201ENST00000603208 874 ntBASIC10.48□□□□□ -0.73
RPL39P62891 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.48□□□□□ -0.73
RPL39P62891 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
RPL39P62891 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 AC114271.1-201ENST00000612689 2813 ntBASIC10.48□□□□□ -0.73
RPL39P62891 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.48□□□□□ -0.73
RPL39P62891 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.48□□□□□ -0.73
RPL39P62891 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 AC068760.1-201ENST00000493579 1953 ntBASIC10.48□□□□□ -0.73
RPL39P62891 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.48□□□□□ -0.73
RPL39P62891 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RPL39P62891 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 AC090643.2-201ENST00000623442 2029 ntBASIC10.47□□□□□ -0.73
RPL39P62891 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
RPL39P62891 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RPL39P62891 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RPL39P62891 MIR940-201ENST00000401276 94 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms