Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SPCS3P61009 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 AC211486.1-202ENST00000416371 468 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 AC254562.1-201ENST00000417586 456 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.11□□□□□ -0.47
SPCS3P61009 AC112482.1-201ENST00000492080 688 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 AC211476.1-201ENST00000503899 468 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.11□□□□□ -0.47
SPCS3P61009 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.11□□□□□ -0.47
SPCS3P61009 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.11□□□□□ -0.47
SPCS3P61009 ZNF890P-202ENST00000530367 1156 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
SPCS3P61009 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 AL358933.1-201ENST00000565046 2830 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 AC087499.5-201ENST00000452760 1342 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 HLA-K-203ENST00000430151 1046 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 AL353779.1-201ENST00000434793 351 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 CNN2P2-201ENST00000443536 909 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 CNN2P3-201ENST00000450201 906 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.1□□□□□ -0.47
SPCS3P61009 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.1□□□□□ -0.47
SPCS3P61009 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.1□□□□□ -0.47
SPCS3P61009 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 AC044860.1-202ENST00000559481 777 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 AC092337.1-201ENST00000568699 1129 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.1□□□□□ -0.47
SPCS3P61009 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SPCS3P61009 AC010327.4-202ENST00000591484 748 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 AL136317.3-201ENST00000618497 906 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms