Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.16□□□□□ -0.14
VSX2P58304 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VSX2P58304 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VSX2P58304 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 CICP14-201ENST00000629111 2732 ntBASIC14.15□□□□□ -0.14
VSX2P58304 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.15□□□□□ -0.14
VSX2P58304 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 FAM8A2P-201ENST00000528813 1142 ntBASIC14.15□□□□□ -0.14
VSX2P58304 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.15□□□□□ -0.14
VSX2P58304 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.15□□□□□ -0.14
VSX2P58304 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 MIR6869-201ENST00000619434 62 ntBASIC14.15□□□□□ -0.14
VSX2P58304 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.15□□□□□ -0.14
VSX2P58304 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 AC005089.1-201ENST00000619486 2241 ntBASIC14.15□□□□□ -0.14
VSX2P58304 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 AC092135.3-201ENST00000624151 1846 ntBASIC14.15□□□□□ -0.14
VSX2P58304 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VSX2P58304 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 E2F3P2-201ENST00000447755 1422 ntBASIC14.15□□□□□ -0.14
VSX2P58304 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
VSX2P58304 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
VSX2P58304 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
VSX2P58304 MRPL37P1-201ENST00000592451 1337 ntBASIC14.15□□□□□ -0.15
VSX2P58304 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VSX2P58304 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.14□□□□□ -0.15
VSX2P58304 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VSX2P58304 INTS4P1-203ENST00000641008 3683 ntBASIC14.14□□□□□ -0.15
VSX2P58304 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 MIR663B-201ENST00000408361 115 ntBASIC14.14□□□□□ -0.15
VSX2P58304 AL354877.1-201ENST00000424412 413 ntBASIC14.14□□□□□ -0.15
VSX2P58304 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.14□□□□□ -0.15
VSX2P58304 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.14□□□□□ -0.15
VSX2P58304 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.14□□□□□ -0.15
VSX2P58304 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.14□□□□□ -0.15
VSX2P58304 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 AC243960.2-201ENST00000600996 747 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms