Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.9□□□□□ -0.02
WNT3AP56704 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 GPR53P-205ENST00000457298 1084 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.9□□□□□ -0.02
WNT3AP56704 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 HILS1-202ENST00000545329 423 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 AP006547.1-201ENST00000563435 692 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 MIR6074-201ENST00000612054 107 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 AL136301.1-201ENST00000615830 422 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
WNT3AP56704 MIR6775-201ENST00000617557 69 ntBASIC14.9□□□□□ -0.02
WNT3AP56704 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.9□□□□□ -0.02
WNT3AP56704 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.9□□□□□ -0.02
WNT3AP56704 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.9□□□□□ -0.02
WNT3AP56704 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
WNT3AP56704 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
WNT3AP56704 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
WNT3AP56704 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 AC012617.1-204ENST00000586340 2305 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 AC067750.1-201ENST00000608826 6545 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
WNT3AP56704 KRT8P28-201ENST00000433288 1390 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 HIST2H2BB-201ENST00000449108 381 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 HOMER2P2-201ENST00000451621 847 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.89□□□□□ -0.03
WNT3AP56704 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 AC008825.2-201ENST00000603374 718 ntBASIC14.89□□□□□ -0.03
WNT3AP56704 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.89□□□□□ -0.03
WNT3AP56704 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.89□□□□□ -0.03
WNT3AP56704 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
WNT3AP56704 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
WNT3AP56704 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
WNT3AP56704 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
WNT3AP56704 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.88□□□□□ -0.03
WNT3AP56704 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
WNT3AP56704 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
WNT3AP56704 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.88□□□□□ -0.03
WNT3AP56704 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
WNT3AP56704 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms