Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 RN7SKP214-201ENST00000364208 315 ntBASIC13.15□□□□□ -0.3
GFRA1P56159 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GFRA1P56159 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GFRA1P56159 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.15□□□□□ -0.3
GFRA1P56159 SPTLC1P5-201ENST00000450718 252 ntBASIC13.15□□□□□ -0.3
GFRA1P56159 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.15□□□□□ -0.3
GFRA1P56159 RN7SL774P-201ENST00000577467 290 ntBASIC13.15□□□□□ -0.3
GFRA1P56159 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GFRA1P56159 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
GFRA1P56159 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFRA1P56159 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
GFRA1P56159 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GFRA1P56159 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GFRA1P56159 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
GFRA1P56159 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GFRA1P56159 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GFRA1P56159 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
GFRA1P56159 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFRA1P56159 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.14□□□□□ -0.31
GFRA1P56159 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GFRA1P56159 KRT18P36-201ENST00000411618 1276 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 CYP46A4P-201ENST00000414953 267 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 XBP1P1-201ENST00000436573 652 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.14□□□□□ -0.31
GFRA1P56159 TPT1P11-201ENST00000458482 498 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 RCC2P8-201ENST00000502779 1035 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
GFRA1P56159 AC022447.6-201ENST00000515522 438 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.14□□□□□ -0.31
GFRA1P56159 AC003686.1-201ENST00000550956 1034 ntBASIC13.14□□□□□ -0.31
GFRA1P56159 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms