Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 DRD5P1-201ENST00000456605 1438 ntBASIC13.5□□□□□ -0.25
CENPAP49450 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.5□□□□□ -0.25
CENPAP49450 AC093813.1-201ENST00000605066 256 ntBASIC13.5□□□□□ -0.25
CENPAP49450 AL391069.4-201ENST00000609583 481 ntBASIC13.5□□□□□ -0.25
CENPAP49450 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CENPAP49450 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.5□□□□□ -0.25
CENPAP49450 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.5□□□□□ -0.25
CENPAP49450 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.5□□□□□ -0.25
CENPAP49450 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CENPAP49450 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 MEP1AP4-201ENST00000423244 1087 ntBASIC13.49□□□□□ -0.25
CENPAP49450 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.49□□□□□ -0.25
CENPAP49450 AL353779.1-201ENST00000434793 351 ntBASIC13.49□□□□□ -0.25
CENPAP49450 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.49□□□□□ -0.25
CENPAP49450 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.49□□□□□ -0.25
CENPAP49450 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 INGX-202ENST00000489074 768 ntBASIC13.49□□□□□ -0.25
CENPAP49450 AC026410.3-201ENST00000514280 936 ntBASIC13.49□□□□□ -0.25
CENPAP49450 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.49□□□□□ -0.25
CENPAP49450 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CENPAP49450 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CENPAP49450 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.49□□□□□ -0.25
CENPAP49450 AC055811.4-201ENST00000624039 1754 ntBASIC13.49□□□□□ -0.25
CENPAP49450 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CENPAP49450 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms