Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.34■□□□□ 0.21
TM4SF4P48230 MAGEA7P-201ENST00000436482 942 ntBASIC16.34■□□□□ 0.21
TM4SF4P48230 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 SLC25A15P3-201ENST00000505530 290 ntBASIC16.34■□□□□ 0.21
TM4SF4P48230 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.34■□□□□ 0.21
TM4SF4P48230 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.34■□□□□ 0.21
TM4SF4P48230 AC091304.3-201ENST00000566500 716 ntBASIC16.34■□□□□ 0.21
TM4SF4P48230 AC079414.2-201ENST00000567157 1104 ntBASIC16.34■□□□□ 0.21
TM4SF4P48230 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.34■□□□□ 0.21
TM4SF4P48230 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TM4SF4P48230 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TM4SF4P48230 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM4SF4P48230 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.33■□□□□ 0.21
TM4SF4P48230 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.33■□□□□ 0.21
TM4SF4P48230 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM4SF4P48230 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.33■□□□□ 0.21
TM4SF4P48230 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.33■□□□□ 0.21
TM4SF4P48230 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.33■□□□□ 0.2
TM4SF4P48230 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC16.33■□□□□ 0.2
TM4SF4P48230 OR2W2P-201ENST00000406313 909 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC16.33■□□□□ 0.2
TM4SF4P48230 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 RHOQP2-201ENST00000449922 579 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 RN7SL846P-201ENST00000467429 292 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 ANKRD26P1-203ENST00000569528 966 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 MIR4746-201ENST00000579802 71 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 AC004466.2-201ENST00000614749 516 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.33■□□□□ 0.2
TM4SF4P48230 AL357143.1-203ENST00000639750 881 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.33■□□□□ 0.2
TM4SF4P48230 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 AC007952.5-201ENST00000572818 1486 ntBASIC16.33■□□□□ 0.2
TM4SF4P48230 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.33■□□□□ 0.2
TM4SF4P48230 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.33■□□□□ 0.2
TM4SF4P48230 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.33■□□□□ 0.2
TM4SF4P48230 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.33■□□□□ 0.2
TM4SF4P48230 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM4SF4P48230 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.33■□□□□ 0.2
TM4SF4P48230 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.32■□□□□ 0.2
TM4SF4P48230 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 ABCD1P4-201ENST00000399687 604 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TM4SF4P48230 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 AC098657.1-201ENST00000416270 1135 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AC136604.1-202ENST00000425471 771 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.32■□□□□ 0.2
TM4SF4P48230 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms