Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 XBP1P1-201ENST00000436573 652 ntBASIC14.47□□□□□ -0.09
TRIM23P36406 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM23P36406 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM23P36406 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM23P36406 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM23P36406 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 AC091544.8-201ENST00000619490 361 ntBASIC14.47□□□□□ -0.09
TRIM23P36406 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 CICP24-201ENST00000605464 2705 ntBASIC14.47□□□□□ -0.09
TRIM23P36406 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM23P36406 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM23P36406 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM23P36406 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRIM23P36406 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM23P36406 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM23P36406 RCC2P8-201ENST00000502779 1035 ntBASIC14.46□□□□□ -0.09
TRIM23P36406 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 AL161670.2-201ENST00000557650 1227 ntBASIC14.46□□□□□ -0.09
TRIM23P36406 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM23P36406 AL606495.2-201ENST00000605867 535 ntBASIC14.46□□□□□ -0.09
TRIM23P36406 AP001505.2-201ENST00000616815 443 ntBASIC14.46□□□□□ -0.09
TRIM23P36406 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRIM23P36406 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
TRIM23P36406 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM23P36406 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM23P36406 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM23P36406 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM23P36406 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.46□□□□□ -0.1
TRIM23P36406 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM23P36406 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM23P36406 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.46□□□□□ -0.1
TRIM23P36406 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM23P36406 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.46□□□□□ -0.1
TRIM23P36406 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms