Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.58■□□□□ 0.08
RFC1P35251 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.58■□□□□ 0.08
RFC1P35251 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.58■□□□□ 0.08
RFC1P35251 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.58■□□□□ 0.08
RFC1P35251 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.58■□□□□ 0.08
RFC1P35251 OR10B1P-201ENST00000601666 907 ntBASIC15.58■□□□□ 0.08
RFC1P35251 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.58■□□□□ 0.08
RFC1P35251 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.58■□□□□ 0.08
RFC1P35251 AC006453.4-201ENST00000636949 1252 ntBASIC15.58■□□□□ 0.08
RFC1P35251 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RFC1P35251 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFC1P35251 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RFC1P35251 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.58■□□□□ 0.08
RFC1P35251 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFC1P35251 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.58■□□□□ 0.08
RFC1P35251 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.58■□□□□ 0.08
RFC1P35251 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.58■□□□□ 0.08
RFC1P35251 MYADML-201ENST00000474610 2147 ntBASIC15.58■□□□□ 0.08
RFC1P35251 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFC1P35251 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFC1P35251 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFC1P35251 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
RFC1P35251 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
RFC1P35251 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 CD8B2-202ENST00000417670 633 ntBASIC15.57■□□□□ 0.08
RFC1P35251 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RFC1P35251 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
RFC1P35251 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.57■□□□□ 0.08
RFC1P35251 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.57■□□□□ 0.08
RFC1P35251 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 AP001002.3-201ENST00000623482 206 ntBASIC15.57■□□□□ 0.08
RFC1P35251 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFC1P35251 AC006504.5-208ENST00000588784 2401 ntBASIC15.57■□□□□ 0.08
RFC1P35251 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.57■□□□□ 0.08
RFC1P35251 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.57■□□□□ 0.08
RFC1P35251 AC015688.4-201ENST00000580780 1647 ntBASIC15.57■□□□□ 0.08
RFC1P35251 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC1P35251 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC1P35251 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 AC006001.1-201ENST00000325130 474 ntBASIC15.56■□□□□ 0.08
RFC1P35251 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC1P35251 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC1P35251 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC1P35251 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 AC138951.2-201ENST00000623455 1161 ntBASIC15.56■□□□□ 0.08
RFC1P35251 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC1P35251 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RFC1P35251 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms