Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.02□□□□□ -0.17
PTPN6P29350 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PTPN6P29350 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
PTPN6P29350 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.01□□□□□ -0.17
PTPN6P29350 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTPN6P29350 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PTPN6P29350 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 ACKR1-201ENST00000368121 1240 ntBASIC14.01□□□□□ -0.17
PTPN6P29350 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
PTPN6P29350 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTPN6P29350 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.01□□□□□ -0.17
PTPN6P29350 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.01□□□□□ -0.17
PTPN6P29350 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.01□□□□□ -0.17
PTPN6P29350 AC068587.3-201ENST00000526613 355 ntBASIC14.01□□□□□ -0.17
PTPN6P29350 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.01□□□□□ -0.17
PTPN6P29350 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.01□□□□□ -0.17
PTPN6P29350 BTNL10-201ENST00000595971 695 ntBASIC14.01□□□□□ -0.17
PTPN6P29350 AC233724.13-201ENST00000598383 410 ntBASIC14.01□□□□□ -0.17
PTPN6P29350 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.01□□□□□ -0.17
PTPN6P29350 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTPN6P29350 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.01□□□□□ -0.17
PTPN6P29350 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 PCDHA3-202ENST00000532566 4594 ntBASIC14□□□□□ -0.17
PTPN6P29350 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 GK-202ENST00000378941 458 ntTSL 3 BASIC14□□□□□ -0.17
PTPN6P29350 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 AC079776.1-201ENST00000401540 1152 ntBASIC14□□□□□ -0.17
PTPN6P29350 BAATP1-201ENST00000412284 1225 ntBASIC14□□□□□ -0.17
PTPN6P29350 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14□□□□□ -0.17
PTPN6P29350 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14□□□□□ -0.17
PTPN6P29350 SLC25A47P1-201ENST00000531577 414 ntBASIC14□□□□□ -0.17
PTPN6P29350 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14□□□□□ -0.17
PTPN6P29350 AC103988.2-201ENST00000561804 725 ntBASIC14□□□□□ -0.17
PTPN6P29350 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTPN6P29350 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms