Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
GABRB3P28472 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRB3P28472 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.62□□□□□ -0.07
GABRB3P28472 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GABRB3P28472 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRB3P28472 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 AC090643.2-201ENST00000623442 2029 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 CNN2P8-201ENST00000421872 913 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 FAM8A4P-201ENST00000435433 1213 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 RN7SL692P-201ENST00000464677 288 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 TMEM198B-204ENST00000484016 896 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 AC078819.1-201ENST00000547454 765 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 AC012085.1-201ENST00000548270 765 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.61□□□□□ -0.07
GABRB3P28472 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 AC015936.2-201ENST00000593177 259 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 AC233724.13-201ENST00000598383 410 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRB3P28472 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.61□□□□□ -0.07
GABRB3P28472 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
GABRB3P28472 OR2I1P-210ENST00000642037 4691 ntBASIC14.61□□□□□ -0.07
GABRB3P28472 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRB3P28472 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRB3P28472 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.6□□□□□ -0.07
GABRB3P28472 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GABRB3P28472 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GABRB3P28472 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
GABRB3P28472 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.6□□□□□ -0.07
GABRB3P28472 ARSEP1-201ENST00000420443 635 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms