Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL1P22362 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCL1P22362 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 AC067750.1-201ENST00000608826 6545 ntBASIC12.67□□□□□ -0.38
CCL1P22362 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CCL1P22362 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL1P22362 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL1P22362 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL1P22362 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL1P22362 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL1P22362 CRB3P1-201ENST00000449338 276 ntBASIC12.66□□□□□ -0.38
CCL1P22362 AL035414.1-201ENST00000451327 857 ntBASIC12.66□□□□□ -0.38
CCL1P22362 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL1P22362 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL1P22362 MIR4745-201ENST00000577608 62 ntBASIC12.66□□□□□ -0.38
CCL1P22362 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL1P22362 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL1P22362 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL1P22362 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL1P22362 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
CCL1P22362 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL1P22362 AC130686.1-201ENST00000622936 2466 ntBASIC12.65□□□□□ -0.38
CCL1P22362 MIR600HG-201ENST00000449175 5984 ntBASIC12.65□□□□□ -0.38
CCL1P22362 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL1P22362 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CCL1P22362 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 AC092933.1-201ENST00000393644 945 ntBASIC12.65□□□□□ -0.38
CCL1P22362 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 AP006294.1-201ENST00000415407 339 ntBASIC12.65□□□□□ -0.38
CCL1P22362 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL1P22362 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CCL1P22362 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL1P22362 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms