Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 AC234783.1-201ENST00000441761 496 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 FAM86LP-201ENST00000478302 853 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.26□□□□□ -0.13
CAPN3P20807 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 AL049840.4-201ENST00000602422 811 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 PRSS30P-206ENST00000641773 873 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 PTENP1-202ENST00000532280 3996 ntBASIC14.26□□□□□ -0.13
CAPN3P20807 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN3P20807 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CAPN3P20807 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CAPN3P20807 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN3P20807 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.25□□□□□ -0.13
CAPN3P20807 MEP1AP4-201ENST00000423244 1087 ntBASIC14.25□□□□□ -0.13
CAPN3P20807 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.25□□□□□ -0.13
CAPN3P20807 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.25□□□□□ -0.13
CAPN3P20807 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.25□□□□□ -0.13
CAPN3P20807 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.25□□□□□ -0.13
CAPN3P20807 VDAC1P7-201ENST00000462417 847 ntBASIC14.25□□□□□ -0.13
CAPN3P20807 AC026434.2-201ENST00000506094 1078 ntBASIC14.25□□□□□ -0.13
CAPN3P20807 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.25□□□□□ -0.13
CAPN3P20807 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 AC133552.6-201ENST00000613406 534 ntBASIC14.25□□□□□ -0.13
CAPN3P20807 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.25□□□□□ -0.13
CAPN3P20807 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 CICP8-201ENST00000455800 2813 ntBASIC14.25□□□□□ -0.13
CAPN3P20807 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.25□□□□□ -0.13
CAPN3P20807 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPN3P20807 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CAPN3P20807 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.24□□□□□ -0.13
CAPN3P20807 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 AC011498.7-201ENST00000624986 2027 ntBASIC14.24□□□□□ -0.13
CAPN3P20807 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.24□□□□□ -0.13
CAPN3P20807 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CAPN3P20807 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CAPN3P20807 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPN3P20807 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.24□□□□□ -0.13
CAPN3P20807 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms