Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AC023310.1-201ENST00000554836 735 ntBASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AC008825.2-201ENST00000603374 718 ntBASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MIR6074-201ENST00000612054 107 ntBASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 IGHV3-71-201ENST00000523324 359 ntBASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AC008687.7-202ENST00000637404 953 ntBASIC14.9□□□□□ -0.02
HLA-DPA1P20036 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 KHSRPP1-201ENST00000427983 1768 ntBASIC14.9□□□□□ -0.02
HLA-DPA1P20036 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPA1P20036 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 CNN2P10-201ENST00000443067 918 ntBASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ACA64.2-201ENST00000459014 129 ntBASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AC104989.1-201ENST00000519711 778 ntBASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 MIR4683-201ENST00000579659 81 ntBASIC14.89□□□□□ -0.03
HLA-DPA1P20036 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 PPY2P-201ENST00000582808 702 ntBASIC14.89□□□□□ -0.03
HLA-DPA1P20036 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPA1P20036 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms