Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 KRT18P33-201ENST00000398525 1043 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 BX679664.3-201ENST00000414070 555 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 AC026884.1-201ENST00000418296 457 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 AC113935.1-201ENST00000471722 555 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 RN7SL672P-201ENST00000474091 317 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 Z82244.2-201ENST00000632196 448 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PKHD1P08F94 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 AC008021.1-201ENST00000474180 414 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC9.08□□□□□ -0.96
PKHD1P08F94 BOLA3P2-201ENST00000586496 323 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 AC005777.1-201ENST00000588332 187 ntBASIC9.08□□□□□ -0.96
PKHD1P08F94 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.08□□□□□ -0.96
PKHD1P08F94 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.08□□□□□ -0.96
PKHD1P08F94 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PKHD1P08F94 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
PKHD1P08F94 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC9.07□□□□□ -0.96
PKHD1P08F94 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC9.07□□□□□ -0.96
PKHD1P08F94 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 OR3A1-202ENST00000615105 966 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
PKHD1P08F94 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 AL365203.3-201ENST00000609742 2057 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 MIR611-201ENST00000384869 67 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 HNRNPA1P21-201ENST00000424115 961 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 SAP18P2-201ENST00000434334 459 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC233724.9-201ENST00000511694 407 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 RNA5SP420-201ENST00000516997 137 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC132812.1-201ENST00000583145 892 ntBASIC9.07□□□□□ -0.96
PKHD1P08F94 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC9.07□□□□□ -0.96
PKHD1P08F94 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC9.07□□□□□ -0.96
PKHD1P08F94 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.07□□□□□ -0.96
PKHD1P08F94 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PKHD1P08F94 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
PKHD1P08F94 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms