Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.12■□□□□ 0.33
CTNND1O60716 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.12■□□□□ 0.33
CTNND1O60716 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 MIR4522-201ENST00000584932 87 ntBASIC17.12■□□□□ 0.33
CTNND1O60716 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 CICP23-201ENST00000605013 2741 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 ST13P19-201ENST00000442505 1124 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 DUX4L50-201ENST00000455245 715 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 RN7SL530P-201ENST00000485097 298 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTNND1O60716 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.11■□□□□ 0.33
CTNND1O60716 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.11■□□□□ 0.33
CTNND1O60716 MIR4649-201ENST00000582839 64 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 AC007326.1-201ENST00000604539 458 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 AL022334.2-201ENST00000610000 484 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 AP001065.2-201ENST00000617205 644 ntBASIC17.11■□□□□ 0.33
CTNND1O60716 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.11■□□□□ 0.33
CTNND1O60716 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.11■□□□□ 0.33
CTNND1O60716 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTNND1O60716 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.1■□□□□ 0.33
CTNND1O60716 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTNND1O60716 AC079112.1-201ENST00000454972 939 ntBASIC17.1■□□□□ 0.33
CTNND1O60716 FTH1P22-201ENST00000456305 520 ntBASIC17.1■□□□□ 0.33
CTNND1O60716 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.1■□□□□ 0.33
CTNND1O60716 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNND1O60716 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms