Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPB4C9JG80 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13□□□□□ -0.33
NPIPB4C9JG80 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13□□□□□ -0.33
NPIPB4C9JG80 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 USP17L6P-201ENST00000382470 1197 ntBASIC13□□□□□ -0.33
NPIPB4C9JG80 AL035633.1-201ENST00000406139 838 ntBASIC13□□□□□ -0.33
NPIPB4C9JG80 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 AC079178.1-201ENST00000420915 656 ntBASIC13□□□□□ -0.33
NPIPB4C9JG80 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13□□□□□ -0.33
NPIPB4C9JG80 HIST2H2BB-201ENST00000449108 381 ntBASIC13□□□□□ -0.33
NPIPB4C9JG80 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13□□□□□ -0.33
NPIPB4C9JG80 GAPDHP21-201ENST00000450301 1010 ntBASIC13□□□□□ -0.33
NPIPB4C9JG80 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13□□□□□ -0.33
NPIPB4C9JG80 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13□□□□□ -0.33
NPIPB4C9JG80 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13□□□□□ -0.33
NPIPB4C9JG80 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13□□□□□ -0.33
NPIPB4C9JG80 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13□□□□□ -0.33
NPIPB4C9JG80 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13□□□□□ -0.33
NPIPB4C9JG80 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPB4C9JG80 AL161772.1-201ENST00000610494 4412 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 REXO1L6P-201ENST00000603433 1515 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AL157407.1-201ENST00000435784 904 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AL645933.1-201ENST00000440087 609 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 KLF2P4-201ENST00000451959 1225 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AC009955.4-201ENST00000597192 544 ntBASIC12.99□□□□□ -0.33
NPIPB4C9JG80 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPB4C9JG80 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms