Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AC108024.1-201ENST00000626286 1721 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AL139094.1-201ENST00000405549 1188 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 MTND6P24-201ENST00000440466 518 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 EMBP1-201ENST00000458200 901 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 UNC93B7-201ENST00000509439 705 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 RNA5SP419-201ENST00000515908 135 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AC003101.2-201ENST00000612557 442 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 BX324167.2-201ENST00000623717 3316 ntBASIC10.37□□□□□ -0.75
LINC01546A6NGU7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01546A6NGU7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms