Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC162PA2VCL2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC006001.1-201ENST00000325130 474 ntBASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CD8B2-202ENST00000417670 633 ntBASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC103988.2-201ENST00000561804 725 ntBASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MIR4683-201ENST00000579659 81 ntBASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 AC041040.2-201ENST00000622926 2899 ntBASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC162PA2VCL2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 HSPA7-201ENST00000445535 1927 ntBASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 AL354989.2-201ENST00000435838 1540 ntBASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 ARSEP1-201ENST00000420443 635 ntBASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC162PA2VCL2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms