Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC015802.1-201ENST00000588104 1449 ntBASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TPM3P8-201ENST00000330554 643 ntBASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AL662890.1-201ENST00000396818 632 ntBASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AL451050.2-201ENST00000606967 682 ntBASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 AL009178.2-201ENST00000597278 2719 ntBASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 AGGF1P1-201ENST00000509500 2073 ntBASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 AL136172.1-201ENST00000598590 1394 ntBASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 MRPL37P1-201ENST00000592451 1337 ntBASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHB1Q9Y5F3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 RN7SKP230-201ENST00000365642 335 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 UPF3AP2-201ENST00000457924 1132 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC015967.2-201ENST00000624092 234 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC006435.4-201ENST00000625037 234 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AL356737.1-201ENST00000634391 234 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 AC005089.1-201ENST00000619486 2241 ntBASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHB1Q9Y5F3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms