Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SSX2IPQ9Y2D8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AC138035.3-201ENST00000622706 2791 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 TLE1P1-201ENST00000422965 589 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AC104073.2-201ENST00000453737 312 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AC125604.1-201ENST00000496255 707 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AC024681.1-201ENST00000521917 487 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 AP000346.4-201ENST00000614827 381 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.91■□□□□ 0.14
SSX2IPQ9Y2D8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 AC006486.2-201ENST00000624246 2199 ntBASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 AL157791.1-201ENST00000553667 1699 ntBASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSX2IPQ9Y2D8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SSX2IPQ9Y2D8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSX2IPQ9Y2D8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms