Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 DGCR5-201ENST00000399539 862 ntBASIC14□□□□□ -0.17
NEUROD4Q9HD90 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 AC012441.1-201ENST00000446669 685 ntBASIC14□□□□□ -0.17
NEUROD4Q9HD90 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PTP4A1P2-201ENST00000546033 454 ntBASIC14□□□□□ -0.17
NEUROD4Q9HD90 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 RAB43P1-201ENST00000561790 589 ntBASIC14□□□□□ -0.17
NEUROD4Q9HD90 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEUROD4Q9HD90 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NEUROD4Q9HD90 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ST20-AS1-201ENST00000560255 4223 ntBASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ACA64.2-201ENST00000459014 129 ntBASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 IGHV3-72-202ENST00000621503 303 ntBASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 LINC01230-201ENST00000625222 3017 ntBASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 AC090505.1-201ENST00000430515 1834 ntBASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEUROD4Q9HD90 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AC117489.1-201ENST00000625169 3217 ntBASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NEUROD4Q9HD90 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms