Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AL161772.1-201ENST00000610494 4412 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 LINC00552-201ENST00000625151 2579 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 RN7SKP230-201ENST00000365642 335 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 FAM58BP-201ENST00000439056 645 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 RPS2P36-201ENST00000456516 831 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AF254983.2-201ENST00000612331 135 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 OR2I1P-210ENST00000642037 4691 ntBASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF3Q9HD45 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 FGD5P1-202ENST00000614866 2498 ntBASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 MIR600HG-201ENST00000449175 5984 ntBASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.77□□□□□ -0.04
TM9SF3Q9HD45 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 MIR33B-201ENST00000385104 96 ntBASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 FTLP1-201ENST00000449155 526 ntBASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 EEF1DP6-201ENST00000449232 372 ntBASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 AL160314.3-201ENST00000556041 767 ntBASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 SNORD3B-2-202ENST00000571722 791 ntBASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF3Q9HD45 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF3Q9HD45 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF3Q9HD45 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF3Q9HD45 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF3Q9HD45 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF3Q9HD45 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms