Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 EIF4HP1-201ENST00000453115 687 ntBASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AC005730.2-201ENST00000564549 1184 ntBASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 NDUFV2P1-201ENST00000596415 907 ntBASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AC106872.11-201ENST00000605838 421 ntBASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A4Q9HBG4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AL662890.1-201ENST00000396818 632 ntBASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 MIR4783-201ENST00000580343 82 ntBASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AC132192.2-201ENST00000596206 1147 ntBASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ATP6V0A4Q9HBG4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 CICP12-201ENST00000455801 843 ntBASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 SERPINA13P-202ENST00000478994 924 ntBASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AC100827.2-201ENST00000563214 1194 ntBASIC16.4■□□□□ 0.22
ATP6V0A4Q9HBG4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms