Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AL162274.1-201ENST00000617191 1098 ntBASIC13.65□□□□□ -0.22
TRIM2Q9C040 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRIM2Q9C040 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
TRIM2Q9C040 MRPL37P1-201ENST00000592451 1337 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC027601.5-201ENST00000624065 2482 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 TTTY23B-201ENST00000442790 549 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC106886.1-201ENST00000568660 600 ntBASIC13.64□□□□□ -0.23
TRIM2Q9C040 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM2Q9C040 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM2Q9C040 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 IGHV3-71-201ENST00000523324 359 ntBASIC13.63□□□□□ -0.23
TRIM2Q9C040 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 AC131206.1-201ENST00000538078 1211 ntBASIC13.63□□□□□ -0.23
TRIM2Q9C040 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms