Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1CQ9BQE3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.02□□□□□ -0.16
TUBA1CQ9BQE3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AL359711.2-201ENST00000563105 872 ntBASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AL049840.4-201ENST00000602422 811 ntBASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1CQ9BQE3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 AC084364.1-201ENST00000551967 1556 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 TMEM14DP-201ENST00000422205 345 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 AC134915.1-201ENST00000426461 574 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 AC007389.4-201ENST00000454674 793 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 GPR53P-205ENST00000457298 1084 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 VDAC1P7-201ENST00000462417 847 ntBASIC14.01□□□□□ -0.17
TUBA1CQ9BQE3 RPL13AP25-201ENST00000484130 612 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms